Spatial Biology Analysis
As new staining technologies such as imaging mass cytometry (Standard BioTools Hyperion XTi™) and high-plex fluorescent panels (Akoya PhenoCycler® or Lunaphore Comet®, etc.) stretch our abilities to interrogate the tumor microenvironment using spatial biology, finding meaningful differences in your data becomes a challenge.
Phenoplex is a complete workflow software for multiplex tissue images in Spatial Biology, built on Visiopharm’s best-in-class AI, with interactive verification steps throughout. Make new discoveries, compare between cohorts, or reproduce previous results, no matter the plex level.
Powered by deep learning
Use the pre-trained cell detection for accurate and robust identification of cells. Train the system to separate your different tissue regions for better spatial biology data.
Solution for
all plex levels
No matter your imaging system and plex level of your assay, Phenoplex has the solution for all spatial biology assays: Fully automated phenotyping for up to 8 Markers and user-guided phenotyping for 8-40+ markers.
Trust
your results
Interactive Data Exploration tools support your data analysis and review steps.
Continuously verify your results during image analysis workflow. Plots can be adjusted to display each tissue compartment, phenotype, biomarker, or cell.
“With this new intuitive module, cell phenotyping of high-plex images has become significantly more manageable with easily adjustable thresholds updated in real time.”
Matthew McFarlane, Image Analysis Scientist, OracleBio
Covering all steps along the Spatial Analysis workflow
“Phenoplex is an efficient workflow with visual verification at each step of the phenotyping process and also enables a rapid quality control to identify potential phenotype outliers using the built-in data exploration t-SNE function.”
Alison Bigley, Principal Scientist at OracleBio
